Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | DSM 17135 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1232116 bp
Thymine Count
1229996 bp
Guanine Count
991003 bp
Cytosine Count
968209 bp
Genome Length
4421324 bp
Protein-coding Genes
3919 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| naphthoate synthase | BACPLE_01988 | Not Available | Negative | 2204584 - 2205408 | 30460.5 |
| 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylic-acid synthase | BACPLE_01989 | Not Available | Negative | 2205413 - 2207077 | 62756.8 |
| isochorismate synthase | BACPLE_01990 | Not Available | Negative | 2207097 - 2208230 | 43170.4 |
| hypothetical protein | BACPLE_01991 | Not Available | Negative | 2208227 - 2208640 | 14855.1 |
| tetratricopeptide repeat protein | BACPLE_01992 | Not Available | Positive | 2208958 - 2210943 | 77779.1 |
| response regulator receiver domain protein | BACPLE_01993 | Not Available | Positive | 2210940 - 2211698 | 29219.6 |
| hypothetical protein | BACPLE_01994 | Not Available | Positive | 2211842 - 2213269 | 51823.5 |
| phosphodiesterase family protein | BACPLE_01995 | Not Available | Negative | 2213392 - 2213931 | 20245.3 |
| pyruvate synthase | BACPLE_01996 | Not Available | Negative | 2214090 - 2217647 | 129698.0 |
| hypothetical protein | BACPLE_01997 | Not Available | Negative | 2217688 - 2218905 | 47589.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

