Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | DSM 17135 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1232116 bp
Thymine Count
1229996 bp
Guanine Count
991003 bp
Cytosine Count
968209 bp
Genome Length
4421324 bp
Protein-coding Genes
3919 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| response regulator receiver domain protein | BACPLE_01978 | Not Available | Negative | 2187825 - 2192006 | 158857.0 |
| glycosyl hydrolase family 2, sugar binding domain protein | BACPLE_01979 | Not Available | Positive | 2192268 - 2193890 | 61555.4 |
| glycoside/pentoside/hexuronide transporter | BACPLE_01980 | Not Available | Positive | 2193900 - 2195396 | 55082.3 |
| glycosyl hydrolase family 10 | BACPLE_01981 | Not Available | Positive | 2195412 - 2196560 | 43564.1 |
| glycosyl hydrolase, family 43 | BACPLE_01982 | Not Available | Positive | 2196610 - 2197587 | 37104.5 |
| glycosyl hydrolase family 67 middle domain protein | BACPLE_01983 | Not Available | Positive | 2197580 - 2199592 | 76491.0 |
| hypothetical protein | BACPLE_01984 | Not Available | Positive | 2199737 - 2200039 | 11123.1 |
| transporter, cpa2 family | BACPLE_01985 | Not Available | Negative | 2200057 - 2202198 | 80473.5 |
| hypothetical protein | BACPLE_01986 | Not Available | Negative | 2202283 - 2203434 | 42024.8 |
| putative o-succinylbenzoate synthase | BACPLE_01987 | Not Available | Negative | 2203436 - 2204494 | 40062.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

