Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | DSM 17135 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1232116 bp
Thymine Count
1229996 bp
Guanine Count
991003 bp
Cytosine Count
968209 bp
Genome Length
4421324 bp
Protein-coding Genes
3919 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| integrase core domain protein | BACPLE_01958 | Not Available | Negative | 2150835 - 2151344 | 19184.9 |
| ispg5, transposase orf1 | BACPLE_01959 | Not Available | Negative | 2151740 - 2152096 | 14087.9 |
| tonb-linked outer membrane protein, susc/raga family | BACPLE_01960 | Not Available | Positive | 2152491 - 2155655 | 118394.0 |
| susd family protein | BACPLE_01961 | Not Available | Positive | 2155732 - 2157567 | 70798.1 |
| tonb-linked outer membrane protein, susc/raga family | BACPLE_01962 | Not Available | Positive | 2157609 - 2160455 | 107005.0 |
| susd family protein | BACPLE_01963 | Not Available | Positive | 2160480 - 2162255 | 66184.8 |
| hypothetical protein | BACPLE_01964 | Not Available | Positive | 2162277 - 2163296 | 37836.4 |
| putative glycosyl hydrolase family 10 | BACPLE_01965 | Not Available | Positive | 2163315 - 2165573 | 83579.4 |
| hypothetical protein | BACPLE_01966 | Not Available | Positive | 2165789 - 2168326 | 97648.3 |
| hypothetical protein | BACPLE_01967 | Not Available | Positive | 2168362 - 2169717 | 50711.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

