Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | DSM 17135 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1232116 bp
Thymine Count
1229996 bp
Guanine Count
991003 bp
Cytosine Count
968209 bp
Genome Length
4421324 bp
Protein-coding Genes
3919 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| electron transport complex, rnfabcdge type, b subunit | BACPLE_01948 | Not Available | Positive | 2142344 - 2143309 | 33197.3 |
| electron transport complex, rnfabcdge type, c subunit | BACPLE_01949 | Not Available | Positive | 2143343 - 2144680 | 47423.4 |
| electron transport complex, rnfabcdge type, d subunit | BACPLE_01950 | Not Available | Positive | 2144693 - 2145682 | 35420.6 |
| electron transport complex, rnfabcdge type, g subunit | BACPLE_01951 | Not Available | Positive | 2145679 - 2146335 | 22337.1 |
| electron transport complex, rnfabcdge type, e subunit | BACPLE_01952 | Not Available | Positive | 2146348 - 2146932 | 20755.7 |
| putative nadh:ubiquinone oxidoreductase, e subunit | BACPLE_01953 | Not Available | Positive | 2146952 - 2147554 | 21314.3 |
| udp-glucose 4-epimerase | BACPLE_01954 | Not Available | Positive | 2147730 - 2148764 | 37990.7 |
| hypothetical protein | BACPLE_01955 | Not Available | Negative | 2148774 - 2148920 | 5701.0 |
| hypothetical protein | BACPLE_01956 | Not Available | Positive | 2148933 - 2149061 | 4945.07 |
| chloride transporter, clc family | BACPLE_01957 | Not Available | Positive | 2149218 - 2150495 | 46064.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

