Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | DSM 17135 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1232116 bp
Thymine Count
1229996 bp
Guanine Count
991003 bp
Cytosine Count
968209 bp
Genome Length
4421324 bp
Protein-coding Genes
3919 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BACPLE_01938 | Not Available | Positive | 2132295 - 2132510 | 8766.49 |
| hypothetical protein | BACPLE_01939 | Not Available | Positive | 2132537 - 2133586 | 40096.7 |
| peptidase dimerization domain protein | BACPLE_01940 | Not Available | Negative | 2133682 - 2135037 | 50331.2 |
| chorismate synthase | BACPLE_01941 | Not Available | Negative | 2135049 - 2136128 | 39475.0 |
| hypothetical protein | BACPLE_01942 | Not Available | Negative | 2136154 - 2137074 | 33048.8 |
| lema family protein | BACPLE_01943 | Not Available | Negative | 2137090 - 2137671 | 21908.9 |
| gtp-binding protein lepa | BACPLE_01944 | Not Available | Positive | 2137777 - 2139558 | 66381.5 |
| phage transcriptional regulator, rina family | BACPLE_01945 | Not Available | Positive | 2139843 - 2140445 | 24200.5 |
| threonine ammonia-lyase | BACPLE_01946 | Not Available | Positive | 2140561 - 2141757 | 42759.9 |
| positive regulator of sigma(e), rsec/mucc | BACPLE_01947 | Not Available | Positive | 2141901 - 2142326 | 15547.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

