Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | DSM 17135 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1232116 bp
Thymine Count
1229996 bp
Guanine Count
991003 bp
Cytosine Count
968209 bp
Genome Length
4421324 bp
Protein-coding Genes
3919 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetyl-coa carboxylase, biotin carboxylase subunit | BACPLE_01898 | Not Available | Positive | 2088783 - 2090294 | 57264.8 |
| biotin-requiring enzyme | BACPLE_01899 | Not Available | Positive | 2090320 - 2090841 | 19158.0 |
| carboxyl transferase domain protein | BACPLE_01900 | Not Available | Positive | 2090838 - 2092370 | 55993.0 |
| putative membrane protein | BACPLE_01901 | Not Available | Positive | 2092481 - 2093386 | 33552.7 |
| atpase family associated with various cellular activities (aaa) | BACPLE_01902 | Not Available | Positive | 2093374 - 2095002 | 61834.8 |
| hypothetical protein | BACPLE_01903 | Not Available | Positive | 2095019 - 2096299 | 50242.6 |
| hypothetical protein | BACPLE_01904 | Not Available | Positive | 2096355 - 2096531 | 6885.23 |
| hypothetical protein | BACPLE_01905 | Not Available | Positive | 2096509 - 2096667 | 6018.32 |
| site-specific recombinase, phage integrase family | BACPLE_01906 | Not Available | Positive | 2097038 - 2098249 | 46663.6 |
| hypothetical protein | BACPLE_01907 | Not Available | Negative | 2098436 - 2098564 | 5020.26 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

