Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | DSM 17135 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1232116 bp
Thymine Count
1229996 bp
Guanine Count
991003 bp
Cytosine Count
968209 bp
Genome Length
4421324 bp
Protein-coding Genes
3919 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BACPLE_01888 | Not Available | Positive | 2073602 - 2074219 | 21880.3 |
| rna polymerase sigma-70 factor | BACPLE_01889 | Not Available | Positive | 2074240 - 2074803 | 21397.8 |
| sigma factor regulatory protein, fecr/pupr family | BACPLE_01890 | Not Available | Positive | 2074796 - 2075776 | 37058.9 |
| tonb-dependent receptor | BACPLE_01891 | Not Available | Positive | 2075766 - 2078198 | 92860.2 |
| transcription-repair coupling factor | BACPLE_01892 | Not Available | Positive | 2078283 - 2081651 | 127814.0 |
| histidine acid phosphatase | BACPLE_01893 | Not Available | Positive | 2081785 - 2083071 | 49309.9 |
| tonb-dependent receptor | BACPLE_01894 | Not Available | Positive | 2083237 - 2085891 | 100032.0 |
| hypothetical protein | BACPLE_01895 | Not Available | Positive | 2085940 - 2087367 | 50855.5 |
| ser/thr phosphatase family protein | BACPLE_01896 | Not Available | Positive | 2087551 - 2088501 | 36291.6 |
| hypothetical protein | BACPLE_01897 | Not Available | Negative | 2088498 - 2088710 | 8105.15 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

