Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | DSM 17135 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1232116 bp
Thymine Count
1229996 bp
Guanine Count
991003 bp
Cytosine Count
968209 bp
Genome Length
4421324 bp
Protein-coding Genes
3919 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydrophobic domain protein | BACPLE_00154 | Not Available | Negative | 140331 - 141689 | 50617.8 |
| polysaccharide biosynthesis protein | BACPLE_00155 | Not Available | Negative | 141743 - 143233 | 56416.4 |
| holliday junction dna helicase ruvb | BACPLE_00156 | Not Available | Negative | 143242 - 144267 | 37914.4 |
| 4fe-4s binding domain protein | BACPLE_00157 | Not Available | Positive | 144387 - 145193 | 29081.8 |
| trna (5-methylaminomethyl-2-thiouridylate)-methyltransferase | BACPLE_00158 | Not Available | Positive | 145211 - 146338 | 42520.4 |
| arylsulfatase | BACPLE_00159 | Not Available | Negative | 146415 - 147983 | 61394.8 |
| beta galactosidase small chain | BACPLE_00160 | Not Available | Negative | 148008 - 151565 | 134043.0 |
| glycosyl hydrolase family 20, catalytic domain protein | BACPLE_00161 | Not Available | Negative | 151603 - 153645 | 78181.6 |
| glycosyl hydrolase family 20, catalytic domain protein | BACPLE_00162 | Not Available | Negative | 153626 - 155974 | 89603.8 |
| tonb-linked outer membrane protein, susc/raga family | BACPLE_00163 | Not Available | Positive | 156465 - 159716 | 120870.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

