Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | DSM 17135 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1232116 bp
Thymine Count
1229996 bp
Guanine Count
991003 bp
Cytosine Count
968209 bp
Genome Length
4421324 bp
Protein-coding Genes
3919 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BACPLE_01878 | Not Available | Negative | 2061791 - 2063962 | 81238.9 |
| hypothetical protein | BACPLE_01879 | Not Available | Positive | 2064228 - 2064833 | 22774.6 |
| acyltransferase | BACPLE_01880 | Not Available | Negative | 2064878 - 2065627 | 28421.2 |
| ser/thr phosphatase family protein | BACPLE_01881 | Not Available | Negative | 2065642 - 2066811 | 44338.3 |
| vitamin b12 dependent methionine synthase, activation domain protein | BACPLE_01882 | Not Available | Negative | 2066826 - 2067731 | 34333.2 |
| amidohydrolase family protein | BACPLE_01883 | Not Available | Negative | 2067742 - 2069082 | 49429.1 |
| glycosyltransferase, group 2 family protein | BACPLE_01884 | Not Available | Negative | 2069092 - 2069838 | 28650.6 |
| putative pantothenate kinase | BACPLE_01885 | Not Available | Positive | 2070235 - 2071071 | 29648.2 |
| tetratricopeptide repeat protein | BACPLE_01887 | Not Available | Negative | 2071116 - 2073281 | 84748.4 |
| hypothetical protein | BACPLE_01886 | Not Available | Positive | 2073280 - 2073432 | 5913.25 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

