Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | DSM 17135 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1232116 bp
Thymine Count
1229996 bp
Guanine Count
991003 bp
Cytosine Count
968209 bp
Genome Length
4421324 bp
Protein-coding Genes
3919 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mate efflux family protein | BACPLE_01868 | Not Available | Positive | 2050669 - 2051991 | 48427.8 |
| signal recognition particle protein | BACPLE_01869 | Not Available | Positive | 2052058 - 2053389 | 49346.2 |
| hypothetical protein | BACPLE_01870 | Not Available | Negative | 2053619 - 2054074 | 18033.3 |
| hypothetical protein | BACPLE_01871 | Not Available | Positive | 2054259 - 2054471 | 8367.41 |
| hypothetical protein | BACPLE_01872 | Not Available | Negative | 2054498 - 2055127 | 23580.1 |
| mate efflux family protein | BACPLE_01873 | Not Available | Negative | 2055197 - 2056570 | 49736.8 |
| peptidase, s8/s53 family | BACPLE_01874 | Not Available | Positive | 2056694 - 2058085 | 50892.4 |
| exodeoxyribonuclease vii, large subunit | BACPLE_01875 | Not Available | Positive | 2058075 - 2059379 | 49690.8 |
| putative exodeoxyribonuclease vii, small subunit | BACPLE_01876 | Not Available | Positive | 2059381 - 2059590 | 8037.58 |
| hypothetical protein | BACPLE_01877 | Not Available | Negative | 2059629 - 2061791 | 81524.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

