Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | DSM 17135 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1232116 bp
Thymine Count
1229996 bp
Guanine Count
991003 bp
Cytosine Count
968209 bp
Genome Length
4421324 bp
Protein-coding Genes
3919 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyruvate formate-lyase 1-activating enzyme | BACPLE_01858 | Not Available | Negative | 2038919 - 2039647 | 27859.7 |
| formate c-acetyltransferase | BACPLE_01859 | Not Available | Negative | 2039736 - 2041958 | 83353.6 |
| Trna-ser | Not Available | Not Available | Positive | 2042215 - 2042301 | Not Available |
| Trna-glu | Not Available | Not Available | Positive | 2042323 - 2042395 | Not Available |
| Trna-ser | Not Available | Not Available | Positive | 2042408 - 2042494 | Not Available |
| alpha-l-fucosidase | BACPLE_01863 | Not Available | Positive | 2042717 - 2044066 | 51551.4 |
| hypothetical protein | BACPLE_01864 | Not Available | Positive | 2044082 - 2046130 | 79444.3 |
| hypothetical protein | BACPLE_01865 | Not Available | Positive | 2046143 - 2047381 | 46352.6 |
| peptidase, s41 family | BACPLE_01866 | Not Available | Negative | 2047465 - 2048967 | 55917.2 |
| outer membrane insertion signal domain protein | BACPLE_01867 | Not Available | Negative | 2049127 - 2050455 | 48854.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

