Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | DSM 17135 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1232116 bp
Thymine Count
1229996 bp
Guanine Count
991003 bp
Cytosine Count
968209 bp
Genome Length
4421324 bp
Protein-coding Genes
3919 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator, arac family | BACPLE_01848 | Not Available | Negative | 2029656 - 2030549 | 34783.9 |
| putative membrane protein | BACPLE_01849 | Not Available | Positive | 2030684 - 2031601 | 33370.1 |
| putative radical sam protein ygiq | BACPLE_01850 | Not Available | Negative | 2031627 - 2033480 | 70647.1 |
| hypothetical protein | BACPLE_01851 | Not Available | Negative | 2033490 - 2033828 | 13203.7 |
| hemerythrin hhe cation binding domain protein | BACPLE_01852 | Not Available | Positive | 2034080 - 2034760 | 26195.5 |
| transcriptional regulator, luxr family | BACPLE_01853 | Not Available | Positive | 2034757 - 2035365 | 22733.6 |
| cysteine-rich domain protein | BACPLE_01854 | Not Available | Positive | 2035657 - 2036397 | 27308.0 |
| putative iron-sulfur cluster-binding protein | BACPLE_01855 | Not Available | Positive | 2036394 - 2037761 | 51322.8 |
| hypothetical protein | BACPLE_01856 | Not Available | Positive | 2037769 - 2038356 | 21372.4 |
| hypothetical protein | BACPLE_01857 | Not Available | Negative | 2038441 - 2038668 | 8674.59 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

