Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | DSM 17135 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1232116 bp
Thymine Count
1229996 bp
Guanine Count
991003 bp
Cytosine Count
968209 bp
Genome Length
4421324 bp
Protein-coding Genes
3919 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| efflux transporter, outer membrane factor lipoprotein, nodt family | BACPLE_01818 | Not Available | Positive | 1991005 - 1992387 | 50229.4 |
| putative acyl-[acyl-carrier-protein]-udp-n-acetylglucosamine o-acyltransferase | BACPLE_01819 | Not Available | Positive | 1992410 - 1993177 | 27568.1 |
| transcriptional regulator, tetr family | BACPLE_01820 | Not Available | Positive | 1993186 - 1993827 | 25185.4 |
| hypothetical protein | BACPLE_01821 | Not Available | Positive | 1994059 - 1995435 | 51345.7 |
| hypothetical protein | BACPLE_01822 | Not Available | Positive | 1995422 - 1996390 | 36283.4 |
| mboat family protein | BACPLE_01823 | Not Available | Positive | 1996356 - 1997858 | 58355.9 |
| Trna-arg | Not Available | Not Available | Positive | 1998022 - 1998093 | Not Available |
| cutc family protein | BACPLE_01825 | Not Available | Positive | 1998355 - 1999104 | 27096.9 |
| transglutaminase-like protein | BACPLE_01826 | Not Available | Negative | 1999088 - 2001724 | 98128.7 |
| putative glucosamine-6-phosphate deaminase | BACPLE_01827 | Not Available | Negative | 2001840 - 2003729 | 71082.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

