Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | DSM 17135 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1232116 bp
Thymine Count
1229996 bp
Guanine Count
991003 bp
Cytosine Count
968209 bp
Genome Length
4421324 bp
Protein-coding Genes
3919 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyl hydrolase, family 31 | BACPLE_01798 | Not Available | Negative | 1957185 - 1959659 | 94918.7 |
| transcriptional regulator, arac family | BACPLE_01799 | Not Available | Negative | 1959788 - 1962658 | 109339.0 |
| integrase core domain protein | BACPLE_01800 | Not Available | Negative | 1962992 - 1963519 | 19753.6 |
| ispg5, transposase orf1 | BACPLE_01801 | Not Available | Negative | 1963897 - 1964253 | 14000.8 |
| transcriptional regulator, arac family | BACPLE_01802 | Not Available | Negative | 1964258 - 1965136 | 33428.8 |
| tonb-dependent receptor plug domain protein | BACPLE_01803 | Not Available | Negative | 1965177 - 1967636 | 92259.2 |
| hypothetical protein | BACPLE_01804 | Not Available | Positive | 1968045 - 1970054 | 72966.3 |
| hypothetical protein | BACPLE_01805 | Not Available | Negative | 1970221 - 1971006 | 29227.1 |
| hypothetical protein | BACPLE_01806 | Not Available | Negative | 1971027 - 1972148 | 41332.7 |
| hypothetical protein | BACPLE_01807 | Not Available | Positive | 1972525 - 1975014 | 90495.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

