Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | DSM 17135 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1232116 bp
Thymine Count
1229996 bp
Guanine Count
991003 bp
Cytosine Count
968209 bp
Genome Length
4421324 bp
Protein-coding Genes
3919 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nitroreductase family protein | BACPLE_01788 | Not Available | Positive | 1946305 - 1947045 | 28063.5 |
| chromosomal replication initiator protein dnaa | BACPLE_01789 | Not Available | Negative | 1947103 - 1948518 | 53712.6 |
| hypothetical protein | BACPLE_01790 | Not Available | Negative | 1948950 - 1949837 | 32274.1 |
| n-acetylmuramoyl-l-alanine amidase | BACPLE_01791 | Not Available | Negative | 1949859 - 1951052 | 44050.8 |
| tetrahydrofolate dehydrogenase/cyclohydrolase, nad(p)-binding domain protein | BACPLE_01792 | Not Available | Positive | 1951221 - 1952099 | 31428.5 |
| Trna-his | Not Available | Not Available | Positive | 1952187 - 1952260 | Not Available |
| Trna-his | Not Available | Not Available | Positive | 1952296 - 1952369 | Not Available |
| glutamate dehydrogenase, nad-specific | BACPLE_01795 | Not Available | Negative | 1952602 - 1953939 | 48779.8 |
| hypothetical protein | BACPLE_01797 | Not Available | Negative | 1954010 - 1954147 | 5193.52 |
| pyruvate phosphate dikinase, pep/pyruvate binding domain protein | BACPLE_01796 | Not Available | Positive | 1954146 - 1957112 | 113466.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

