Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | DSM 17135 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1232116 bp
Thymine Count
1229996 bp
Guanine Count
991003 bp
Cytosine Count
968209 bp
Genome Length
4421324 bp
Protein-coding Genes
3919 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BACPLE_00144 | Not Available | Negative | 130891 - 131214 | 12052.5 |
| dead/deah box helicase | BACPLE_00145 | Not Available | Negative | 131417 - 133306 | 71439.2 |
| riboflavin biosynthesis protein ribf | BACPLE_00146 | Not Available | Negative | 133366 - 134298 | 35066.3 |
| had hydrolase, family ia, variant 3 | BACPLE_00147 | Not Available | Negative | 134299 - 134922 | 24207.2 |
| calcium-translocating p-type atpase, pmca-type | BACPLE_00148 | Not Available | Negative | 134919 - 137546 | 96313.7 |
| Trna-met | Not Available | Not Available | Positive | 137709 - 137785 | Not Available |
| hypothetical protein | BACPLE_00150 | Not Available | Positive | 137934 - 138692 | 28357.1 |
| integrase core domain protein | BACPLE_00151 | Not Available | Negative | 139021 - 139530 | 19184.9 |
| hypothetical protein | BACPLE_00152 | Not Available | Positive | 139600 - 139827 | 8384.99 |
| ispg5, transposase orf1 | BACPLE_00153 | Not Available | Negative | 139926 - 140282 | 14060.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

