Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | DSM 17135 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1232116 bp
Thymine Count
1229996 bp
Guanine Count
991003 bp
Cytosine Count
968209 bp
Genome Length
4421324 bp
Protein-coding Genes
3919 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BACPLE_01718 | Not Available | Positive | 1884452 - 1885561 | 44010.9 |
| putative prtrc system protein b | BACPLE_01719 | Not Available | Positive | 1885567 - 1886268 | 26830.5 |
| prtrc system thif family protein | BACPLE_01720 | Not Available | Positive | 1886265 - 1887047 | 29439.7 |
| hypothetical protein | BACPLE_01721 | Not Available | Negative | 1887102 - 1887407 | 11779.3 |
| hypothetical protein | BACPLE_01722 | Not Available | Positive | 1887663 - 1888028 | 14338.3 |
| dna binding domain, excisionase family | BACPLE_01723 | Not Available | Positive | 1888003 - 1888296 | 11612.9 |
| transcriptional regulator, arac family | BACPLE_01725 | Not Available | Negative | 1888750 - 1889616 | 33430.2 |
| oxidoreductase, short chain dehydrogenase/reductase family protein | BACPLE_01724 | Not Available | Positive | 1889615 - 1890547 | 33068.9 |
| mannonate dehydratase | BACPLE_01726 | Not Available | Positive | 1890566 - 1891747 | 45095.9 |
| transcriptional regulator, arac family | BACPLE_01727 | Not Available | Negative | 1891749 - 1892585 | 32085.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

