Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | DSM 17135 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1232116 bp
Thymine Count
1229996 bp
Guanine Count
991003 bp
Cytosine Count
968209 bp
Genome Length
4421324 bp
Protein-coding Genes
3919 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carbohydrate binding domain protein | BACPLE_01688 | Not Available | Negative | 1843668 - 1844159 | 18562.1 |
| glycosyl hydrolase family 16 | BACPLE_01689 | Not Available | Negative | 1844206 - 1845171 | 37254.8 |
| hypothetical protein | BACPLE_01690 | Not Available | Negative | 1845573 - 1845767 | 7089.64 |
| hypothetical protein | BACPLE_01691 | Not Available | Negative | 1845931 - 1846059 | 4966.31 |
| hypothetical protein | BACPLE_01692 | Not Available | Negative | 1846178 - 1847488 | 47978.2 |
| carbohydrate binding domain protein | BACPLE_01693 | Not Available | Negative | 1847494 - 1849680 | 81285.3 |
| hypothetical protein | BACPLE_01694 | Not Available | Negative | 1849731 - 1851455 | 66058.9 |
| hypothetical protein | BACPLE_01695 | Not Available | Negative | 1851650 - 1852204 | 21303.9 |
| hypothetical protein | BACPLE_01696 | Not Available | Negative | 1852220 - 1853944 | 64779.1 |
| susd family protein | BACPLE_01697 | Not Available | Negative | 1853950 - 1855986 | 78323.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

