Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | DSM 17135 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1232116 bp
Thymine Count
1229996 bp
Guanine Count
991003 bp
Cytosine Count
968209 bp
Genome Length
4421324 bp
Protein-coding Genes
3919 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BACPLE_01658 | Not Available | Negative | 1808374 - 1808811 | 16747.2 |
| hypothetical protein | BACPLE_01659 | Not Available | Negative | 1808817 - 1809569 | 28679.8 |
| hypothetical protein | BACPLE_01660 | Not Available | Negative | 1810109 - 1810285 | 6447.8 |
| hypothetical protein | BACPLE_01661 | Not Available | Positive | 1810298 - 1810804 | 19920.3 |
| relaxase/mobilization nuclease domain protein | BACPLE_01662 | Not Available | Positive | 1810789 - 1812051 | 48277.1 |
| hypothetical protein | BACPLE_01663 | Not Available | Positive | 1812114 - 1813037 | 35558.4 |
| reverse transcriptase (rna-dependent dna polymerase) | BACPLE_01664 | Not Available | Positive | 1813674 - 1815326 | 64611.4 |
| trag family protein | BACPLE_01665 | Not Available | Positive | 1815331 - 1816566 | 46209.3 |
| hypothetical protein | BACPLE_01666 | Not Available | Positive | 1816825 - 1817274 | 17691.6 |
| sigma-54 interaction domain protein | BACPLE_01667 | Not Available | Negative | 1817278 - 1818561 | 48023.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

