Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | DSM 17135 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1232116 bp
Thymine Count
1229996 bp
Guanine Count
991003 bp
Cytosine Count
968209 bp
Genome Length
4421324 bp
Protein-coding Genes
3919 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| toxin-antitoxin system, toxin component, rele family | BACPLE_01638 | Not Available | Positive | 1794745 - 1795080 | 13481.3 |
| dna-binding helix-turn-helix protein | BACPLE_01639 | Not Available | Positive | 1795064 - 1795369 | 11356.9 |
| hypothetical protein | BACPLE_01640 | Not Available | Positive | 1795369 - 1795716 | 13631.1 |
| hypothetical protein | BACPLE_01641 | Not Available | Negative | 1795761 - 1796216 | 17733.6 |
| hypothetical protein | BACPLE_01642 | Not Available | Negative | 1796264 - 1796767 | 19089.4 |
| hypothetical protein | BACPLE_01643 | Not Available | Negative | 1796764 - 1797624 | 32201.0 |
| hypothetical protein | BACPLE_01644 | Not Available | Negative | 1797631 - 1798188 | 20515.9 |
| conjugative transposon tran protein | BACPLE_01645 | Not Available | Negative | 1798185 - 1799132 | 36403.1 |
| conjugative transposon tram protein | BACPLE_01646 | Not Available | Negative | 1799146 - 1800345 | 44287.6 |
| hypothetical protein | BACPLE_01647 | Not Available | Negative | 1800389 - 1800706 | 12065.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

