Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | DSM 17135 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1232116 bp
Thymine Count
1229996 bp
Guanine Count
991003 bp
Cytosine Count
968209 bp
Genome Length
4421324 bp
Protein-coding Genes
3919 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BACPLE_01598 | Not Available | Negative | 1758087 - 1759010 | 33135.2 |
| hypothetical protein | BACPLE_01599 | Not Available | Positive | 1759164 - 1759331 | 6379.55 |
| phenylalanine--trna ligase, alpha subunit | BACPLE_01600 | Not Available | Negative | 1759398 - 1760417 | 38521.1 |
| hypothetical protein | BACPLE_01601 | Not Available | Positive | 1760563 - 1761417 | 33680.9 |
| udp-n-acetylmuramate dehydrogenase | BACPLE_01602 | Not Available | Positive | 1761424 - 1762449 | 38268.0 |
| metallo-beta-lactamase domain protein | BACPLE_01603 | Not Available | Positive | 1762446 - 1763243 | 30072.4 |
| glycine--trna ligase | BACPLE_01604 | Not Available | Positive | 1763352 - 1764893 | 59463.0 |
| peptidyl-prolyl cis-trans isomerase, fkbp-type | BACPLE_01605 | Not Available | Positive | 1764908 - 1765582 | 25005.5 |
| hypothetical protein | BACPLE_01606 | Not Available | Positive | 1765686 - 1765847 | 5992.59 |
| hypothetical protein | BACPLE_01607 | Not Available | Positive | 1765992 - 1766414 | 15660.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

