Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | DSM 17135 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1232116 bp
Thymine Count
1229996 bp
Guanine Count
991003 bp
Cytosine Count
968209 bp
Genome Length
4421324 bp
Protein-coding Genes
3919 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha-l-fucosidase | BACPLE_01588 | Not Available | Positive | 1746335 - 1747657 | 49847.2 |
| nicotinate phosphoribosyltransferase | BACPLE_01589 | Not Available | Positive | 1747755 - 1748927 | 45642.5 |
| 2-isopropylmalate synthase | BACPLE_01590 | Not Available | Positive | 1749238 - 1750734 | 54635.3 |
| 3-isopropylmalate dehydratase, large subunit | BACPLE_01591 | Not Available | Positive | 1750754 - 1752151 | 50734.0 |
| 3-isopropylmalate dehydratase, small subunit | BACPLE_01592 | Not Available | Positive | 1752155 - 1752760 | 22761.0 |
| hmgl-like protein | BACPLE_01593 | Not Available | Positive | 1752779 - 1754311 | 57411.9 |
| 3-isopropylmalate dehydrogenase | BACPLE_01594 | Not Available | Positive | 1754324 - 1755385 | 39111.0 |
| peptide-methionine (s)-s-oxide reductase | BACPLE_01595 | Not Available | Negative | 1755447 - 1755875 | 16217.8 |
| tetratricopeptide repeat protein | BACPLE_01596 | Not Available | Positive | 1755879 - 1756862 | 37802.7 |
| hypothetical protein | BACPLE_01597 | Not Available | Positive | 1756941 - 1758080 | 42741.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

