Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | DSM 17135 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1232116 bp
Thymine Count
1229996 bp
Guanine Count
991003 bp
Cytosine Count
968209 bp
Genome Length
4421324 bp
Protein-coding Genes
3919 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribonuclease iii | BACPLE_01577 | Not Available | Positive | 1731674 - 1732693 | 38779.8 |
| hypothetical protein | BACPLE_01578 | Not Available | Negative | 1732833 - 1733648 | 31352.0 |
| hypothetical protein | BACPLE_01579 | Not Available | Negative | 1733645 - 1735570 | 73782.8 |
| gh3 auxin-responsive promoter | BACPLE_01580 | Not Available | Negative | 1735580 - 1737085 | 57471.0 |
| phosphofructokinase | BACPLE_01581 | Not Available | Positive | 1737239 - 1738249 | 35712.4 |
| hypothetical protein | BACPLE_01582 | Not Available | Positive | 1738766 - 1739215 | 15886.8 |
| f5/8 type c domain protein | BACPLE_01583 | Not Available | Positive | 1739277 - 1741847 | 97238.2 |
| cysteine--trna ligase | BACPLE_01584 | Not Available | Negative | 1741921 - 1743402 | 56113.0 |
| hypothetical protein | BACPLE_01585 | Not Available | Negative | 1743500 - 1744720 | 46314.2 |
| hypothetical protein | BACPLE_01586 | Not Available | Negative | 1745416 - 1745874 | 17235.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

