Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | DSM 17135 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1232116 bp
Thymine Count
1229996 bp
Guanine Count
991003 bp
Cytosine Count
968209 bp
Genome Length
4421324 bp
Protein-coding Genes
3919 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thiamine-phosphate kinase | BACPLE_01537 | Not Available | Positive | 1689946 - 1690983 | 37881.5 |
| Trna-phe | Not Available | Not Available | Positive | 1691208 - 1691280 | Not Available |
| peptidase, s9a/b/c family, catalytic domain protein | BACPLE_01539 | Not Available | Negative | 1691453 - 1693678 | 83894.9 |
| putative chlorophyll synthesis pathway protein bchc | BACPLE_01540 | Not Available | Negative | 1693854 - 1694870 | 36283.2 |
| l-fucose:h+ symporter permease | BACPLE_01541 | Not Available | Negative | 1694904 - 1696160 | 46865.2 |
| amidohydrolase family protein | BACPLE_01542 | Not Available | Negative | 1696173 - 1697096 | 35344.8 |
| oxidoreductase, aldo/keto reductase family protein | BACPLE_01543 | Not Available | Negative | 1697112 - 1698044 | 34750.4 |
| hypothetical protein | BACPLE_01544 | Not Available | Negative | 1698057 - 1698437 | 14996.2 |
| alpha-l-fucosidase | BACPLE_01546 | Not Available | Negative | 1698452 - 1700053 | 60880.9 |
| hypothetical protein | BACPLE_01545 | Not Available | Positive | 1700052 - 1700285 | 9116.55 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

