Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | DSM 17135 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1232116 bp
Thymine Count
1229996 bp
Guanine Count
991003 bp
Cytosine Count
968209 bp
Genome Length
4421324 bp
Protein-coding Genes
3919 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arylsulfatase | BACPLE_01527 | Not Available | Positive | 1675820 - 1677640 | 68350.6 |
| nitroreductase family protein | BACPLE_01528 | Not Available | Negative | 1677646 - 1678293 | 23867.9 |
| f5/8 type c domain protein | BACPLE_01529 | Not Available | Negative | 1678314 - 1680128 | 68571.8 |
| phosphoenolpyruvate carboxykinase (atp) | BACPLE_01530 | Not Available | Negative | 1680297 - 1681901 | 59053.2 |
| putative uracil phosphoribosyltransferase | BACPLE_01531 | Not Available | Positive | 1682176 - 1682835 | 24612.5 |
| thiamine pyrophosphate enzyme, c-terminal tpp binding domain protein | BACPLE_01532 | Not Available | Negative | 1682896 - 1683906 | 36696.7 |
| 2-oxoacid:acceptor oxidoreductase, alpha subunit | BACPLE_01533 | Not Available | Negative | 1683940 - 1685787 | 66537.2 |
| signal peptide peptidase sppa, 67k type | BACPLE_01534 | Not Available | Positive | 1686296 - 1688056 | 65049.0 |
| tetraacyldisaccharide 4'-kinase | BACPLE_01535 | Not Available | Positive | 1688072 - 1689172 | 41581.7 |
| purine nucleoside phosphorylase i, inosine and guanosine-specific | BACPLE_01536 | Not Available | Positive | 1689129 - 1689938 | 29756.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

