Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | DSM 17135 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1232116 bp
Thymine Count
1229996 bp
Guanine Count
991003 bp
Cytosine Count
968209 bp
Genome Length
4421324 bp
Protein-coding Genes
3919 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| initiator repb protein | BACPLE_01517 | Not Available | Negative | 1668647 - 1669651 | 39291.7 |
| hypothetical protein | BACPLE_01518 | Not Available | Negative | 1669602 - 1669787 | 7198.52 |
| hypothetical protein | BACPLE_01519 | Not Available | Positive | 1670252 - 1670503 | 9466.3 |
| putative addiction module toxin, txe/yoeb family | BACPLE_01520 | Not Available | Positive | 1670500 - 1670775 | 10689.9 |
| hypothetical protein | BACPLE_01521 | Not Available | Positive | 1670786 - 1670945 | 6159.11 |
| hypothetical protein | BACPLE_01522 | Not Available | Negative | 1670946 - 1671223 | 10526.2 |
| peptidase m16 inactive domain protein | BACPLE_01523 | Not Available | Positive | 1671504 - 1672727 | 46623.5 |
| transcriptional regulator, arac family | BACPLE_01524 | Not Available | Positive | 1672801 - 1673190 | 15331.8 |
| arginine--trna ligase | BACPLE_01525 | Not Available | Positive | 1673276 - 1675093 | 68490.4 |
| hypothetical protein | BACPLE_01526 | Not Available | Positive | 1675177 - 1675803 | 23800.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

