Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | DSM 17135 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1232116 bp
Thymine Count
1229996 bp
Guanine Count
991003 bp
Cytosine Count
968209 bp
Genome Length
4421324 bp
Protein-coding Genes
3919 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase, group 2 family protein | BACPLE_01507 | Not Available | Negative | 1661867 - 1662916 | 40805.4 |
| udp-galactopyranose mutase | BACPLE_01508 | Not Available | Negative | 1662927 - 1664045 | 43560.7 |
| polysaccharide biosynthesis protein | BACPLE_01509 | Not Available | Negative | 1664089 - 1665432 | 49914.1 |
| ispg5, transposase orf1 | BACPLE_01510 | Not Available | Positive | 1665855 - 1666211 | 14000.8 |
| ispg5, transposase orf2 | BACPLE_01511 | Not Available | Positive | 1666247 - 1666564 | 12393.1 |
| hypothetical protein | BACPLE_01512 | Not Available | Positive | 1666750 - 1666908 | 6164.93 |
| hypothetical protein | BACPLE_01513 | Not Available | Positive | 1666859 - 1667158 | 11744.1 |
| relaxase/mobilization nuclease domain protein | BACPLE_01514 | Not Available | Positive | 1667155 - 1667949 | 29400.0 |
| hypothetical protein | BACPLE_01515 | Not Available | Positive | 1667906 - 1668358 | 17571.8 |
| hypothetical protein | BACPLE_01516 | Not Available | Positive | 1668378 - 1668608 | 8349.14 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

