Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | DSM 17135 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1232116 bp
Thymine Count
1229996 bp
Guanine Count
991003 bp
Cytosine Count
968209 bp
Genome Length
4421324 bp
Protein-coding Genes
3919 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad dependent epimerase/dehydratase family protein | BACPLE_01497 | Not Available | Negative | 1651732 - 1652850 | 42007.5 |
| gdp-mannose 4,6-dehydratase | BACPLE_01498 | Not Available | Negative | 1652912 - 1654003 | 41170.1 |
| hypothetical protein | BACPLE_01499 | Not Available | Negative | 1654096 - 1654539 | 17278.6 |
| hypothetical protein | BACPLE_01500 | Not Available | Negative | 1654552 - 1656039 | 55887.2 |
| chain length determinant protein | BACPLE_01501 | Not Available | Negative | 1656057 - 1657166 | 41767.6 |
| glycosyltransferase, group 2 family protein | BACPLE_01502 | Not Available | Negative | 1657215 - 1657991 | 30207.8 |
| hypothetical protein | BACPLE_01503 | Not Available | Negative | 1658050 - 1658841 | 30171.6 |
| hypothetical protein | BACPLE_01504 | Not Available | Negative | 1658838 - 1659911 | 41935.3 |
| hypothetical protein | BACPLE_01505 | Not Available | Negative | 1659911 - 1660636 | 28457.3 |
| glycosyltransferase, group 1 family protein | BACPLE_01506 | Not Available | Negative | 1660612 - 1661781 | 45337.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

