Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | DSM 17135 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1232116 bp
Thymine Count
1229996 bp
Guanine Count
991003 bp
Cytosine Count
968209 bp
Genome Length
4421324 bp
Protein-coding Genes
3919 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| relaxase/mobilization nuclease domain protein | BACPLE_01487 | Not Available | Negative | 1642738 - 1643685 | 35770.1 |
| bacterial mobilization protein mobc | BACPLE_01488 | Not Available | Negative | 1643682 - 1644047 | 13955.8 |
| hypothetical protein | BACPLE_01489 | Not Available | Negative | 1644069 - 1644227 | 5887.02 |
| hypothetical protein | BACPLE_01490 | Not Available | Negative | 1644224 - 1645162 | 35534.8 |
| hypothetical protein | BACPLE_01491 | Not Available | Negative | 1645420 - 1646667 | 48969.9 |
| hypothetical protein | BACPLE_01492 | Not Available | Negative | 1646683 - 1646844 | 6363.88 |
| hypothetical protein | BACPLE_01493 | Not Available | Negative | 1646903 - 1647292 | 14880.9 |
| site-specific recombinase, phage integrase family | BACPLE_01494 | Not Available | Negative | 1647289 - 1648512 | 46744.0 |
| transglycosylase | BACPLE_01495 | Not Available | Positive | 1648822 - 1651149 | 88530.9 |
| transcription termination/antitermination factor nusg | BACPLE_01496 | Not Available | Negative | 1651211 - 1651726 | 20003.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

