Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | DSM 17135 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1232116 bp
Thymine Count
1229996 bp
Guanine Count
991003 bp
Cytosine Count
968209 bp
Genome Length
4421324 bp
Protein-coding Genes
3919 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosomal protein s4 | BACPLE_00114 | Not Available | Negative | 114099 - 114704 | 22617.5 |
| 30s ribosomal protein s11 | BACPLE_00115 | Not Available | Negative | 114822 - 115211 | 13878.8 |
| 30s ribosomal protein s13 | BACPLE_00116 | Not Available | Negative | 115220 - 115600 | 14149.3 |
| translation initiation factor if-1 | BACPLE_00117 | Not Available | Negative | 115766 - 115984 | 8235.14 |
| methionine aminopeptidase, type i | BACPLE_00118 | Not Available | Negative | 115986 - 116783 | 29237.3 |
| preprotein translocase, secy subunit | BACPLE_00119 | Not Available | Negative | 116800 - 118146 | 49138.4 |
| ribosomal protein l15 | BACPLE_00120 | Not Available | Negative | 118151 - 118597 | 15613.9 |
| ribosomal protein l30 | BACPLE_00121 | Not Available | Negative | 118628 - 118804 | 6489.21 |
| ribosomal protein s5 | BACPLE_00122 | Not Available | Negative | 118816 - 119331 | 17807.8 |
| ribosomal protein l18 | BACPLE_00123 | Not Available | Negative | 119338 - 119679 | 12601.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

