Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | DSM 17135 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1232116 bp
Thymine Count
1229996 bp
Guanine Count
991003 bp
Cytosine Count
968209 bp
Genome Length
4421324 bp
Protein-coding Genes
3919 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transporter, cation channel family protein | BACPLE_01467 | Not Available | Negative | 1622820 - 1623710 | 34169.4 |
| membrane protein insertase, yidc/oxa1 family domain protein | BACPLE_01468 | Not Available | Negative | 1623845 - 1625704 | 71324.1 |
| ctp synthase | BACPLE_01469 | Not Available | Negative | 1625734 - 1627332 | 60112.2 |
| outer membrane insertion signal domain protein | BACPLE_01470 | Not Available | Positive | 1627672 - 1629138 | 56692.4 |
| hypothetical protein | BACPLE_01471 | Not Available | Positive | 1629149 - 1629784 | 23315.4 |
| monofunctional biosynthetic peptidoglycan transglycosylase | BACPLE_01472 | Not Available | Negative | 1629796 - 1630491 | 26815.2 |
| ompa family protein | BACPLE_01473 | Not Available | Negative | 1630574 - 1631290 | 24302.8 |
| glycine hydroxymethyltransferase | BACPLE_01474 | Not Available | Negative | 1631315 - 1632595 | 47048.7 |
| hypothetical protein | BACPLE_01475 | Not Available | Negative | 1632626 - 1633363 | 27802.7 |
| flavin reductase-like protein | BACPLE_01476 | Not Available | Negative | 1633371 - 1633937 | 21185.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

