Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | DSM 17135 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1232116 bp
Thymine Count
1229996 bp
Guanine Count
991003 bp
Cytosine Count
968209 bp
Genome Length
4421324 bp
Protein-coding Genes
3919 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fha domain protein | BACPLE_01457 | Not Available | Negative | 1615045 - 1615584 | 20297.4 |
| gram-positive signal peptide protein, ysirk family | BACPLE_01458 | Not Available | Negative | 1615604 - 1616728 | 41288.8 |
| hypothetical protein | BACPLE_01459 | Not Available | Positive | 1616844 - 1617632 | 29525.4 |
| ribosome biogenesis gtp-binding protein ysxc | BACPLE_01460 | Not Available | Negative | 1617701 - 1618312 | 23399.3 |
| recombination protein recr | BACPLE_01461 | Not Available | Positive | 1618365 - 1619075 | 26287.0 |
| hypothetical protein | BACPLE_01462 | Not Available | Positive | 1619088 - 1619549 | 17454.1 |
| acetyltransferase, gnat family | BACPLE_01463 | Not Available | Positive | 1619557 - 1620072 | 19203.0 |
| Trna-pro | Not Available | Not Available | Positive | 1620322 - 1620399 | Not Available |
| Trna-pro | Not Available | Not Available | Positive | 1620435 - 1620509 | Not Available |
| peptidase, s9a/b/c family, catalytic domain protein | BACPLE_01466 | Not Available | Negative | 1620670 - 1622796 | 80165.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

