Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | DSM 17135 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1232116 bp
Thymine Count
1229996 bp
Guanine Count
991003 bp
Cytosine Count
968209 bp
Genome Length
4421324 bp
Protein-coding Genes
3919 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| exonuclease sbccd, d subunit | BACPLE_01437 | Not Available | Positive | 1590448 - 1591662 | 46258.9 |
| exonuclease sbccd, c subunit | BACPLE_01438 | Not Available | Positive | 1591666 - 1595100 | 129946.0 |
| putative dihydroorotate oxidase | BACPLE_01439 | Not Available | Positive | 1595285 - 1596334 | 39131.7 |
| cytochrome c nitrate reductase, small subunit | BACPLE_01440 | Not Available | Positive | 1596465 - 1597115 | 24320.8 |
| nitrite reductase | BACPLE_01441 | Not Available | Positive | 1597133 - 1598608 | 55836.4 |
| hypothetical protein | BACPLE_01442 | Not Available | Positive | 1598614 - 1599840 | 45844.2 |
| cytochrome c assembly protein | BACPLE_01443 | Not Available | Positive | 1599848 - 1600639 | 30557.0 |
| hypothetical protein | BACPLE_01444 | Not Available | Positive | 1600656 - 1601936 | 48056.4 |
| cyclic nucleotide-binding domain protein | BACPLE_01445 | Not Available | Negative | 1602000 - 1602746 | 28877.4 |
| pyridoxamine 5'-phosphate oxidase family protein | BACPLE_01446 | Not Available | Positive | 1602884 - 1603399 | 19320.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

