Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | DSM 17135 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1232116 bp
Thymine Count
1229996 bp
Guanine Count
991003 bp
Cytosine Count
968209 bp
Genome Length
4421324 bp
Protein-coding Genes
3919 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aminotransferase, class i/ii | BACPLE_01427 | Not Available | Positive | 1579108 - 1580310 | 45093.2 |
| efflux abc transporter, permease protein | BACPLE_01428 | Not Available | Positive | 1580307 - 1581557 | 46499.0 |
| proline--trna ligase | BACPLE_01429 | Not Available | Positive | 1581648 - 1583138 | 56961.1 |
| putative leucyltransferase | BACPLE_01430 | Not Available | Negative | 1583214 - 1583633 | 15811.2 |
| hypothetical protein | BACPLE_01431 | Not Available | Positive | 1583637 - 1583873 | 8536.14 |
| putative atp-dependent clp protease atp-binding subunit clpa | BACPLE_01432 | Not Available | Negative | 1583866 - 1586082 | 83312.9 |
| atp-dependent clp protease adaptor protein clps | BACPLE_01433 | Not Available | Negative | 1586097 - 1586405 | 11843.2 |
| hypothetical protein | BACPLE_01434 | Not Available | Negative | 1586439 - 1587107 | 23533.2 |
| peptidase, m48 family | BACPLE_01435 | Not Available | Negative | 1587129 - 1587923 | 28993.9 |
| peptidase, s9a/b/c family, catalytic domain protein | BACPLE_01436 | Not Available | Positive | 1587962 - 1590442 | 92900.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

