Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | DSM 17135 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1232116 bp
Thymine Count
1229996 bp
Guanine Count
991003 bp
Cytosine Count
968209 bp
Genome Length
4421324 bp
Protein-coding Genes
3919 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BACPLE_01387 | Not Available | Positive | 1526408 - 1527004 | 22928.7 |
| hypothetical protein | BACPLE_01388 | Not Available | Positive | 1527015 - 1527137 | 4767.67 |
| mate efflux family protein | BACPLE_01389 | Not Available | Positive | 1527197 - 1528570 | 49998.2 |
| gmp synthase (glutamine-hydrolyzing) domain protein | BACPLE_01390 | Not Available | Negative | 1528631 - 1530184 | 57799.5 |
| rnase h domain protein, yqgf family | BACPLE_01391 | Not Available | Positive | 1530371 - 1530787 | 15713.4 |
| peptide deformylase | BACPLE_01392 | Not Available | Positive | 1530809 - 1531363 | 20955.5 |
| tetratricopeptide repeat protein | BACPLE_01393 | Not Available | Positive | 1531360 - 1533363 | 77832.0 |
| threonine--trna ligase | BACPLE_01394 | Not Available | Positive | 1533438 - 1535378 | 74247.1 |
| translation initiation factor if-3 | BACPLE_01395 | Not Available | Positive | 1535480 - 1536061 | 22031.8 |
| ribosomal protein l35 | BACPLE_01396 | Not Available | Positive | 1536132 - 1536329 | 7371.38 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

