Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | DSM 17135 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1232116 bp
Thymine Count
1229996 bp
Guanine Count
991003 bp
Cytosine Count
968209 bp
Genome Length
4421324 bp
Protein-coding Genes
3919 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cyclically-permuted mutarotase family protein | BACPLE_00104 | Not Available | Negative | 103654 - 106146 | 91622.2 |
| transcriptional regulator, gntr family | BACPLE_00105 | Not Available | Negative | 106223 - 106951 | 27771.0 |
| hypothetical protein | BACPLE_00106 | Not Available | Negative | 106944 - 107069 | 5092.18 |
| hypothetical protein | BACPLE_00107 | Not Available | Positive | 107325 - 108938 | 60975.5 |
| renal dipeptidase family protein | BACPLE_00108 | Not Available | Positive | 109121 - 110890 | 66104.4 |
| peptidase, m28 family | BACPLE_00109 | Not Available | Positive | 110969 - 111970 | 37268.7 |
| fe-s metabolism associated domain protein | BACPLE_00110 | Not Available | Positive | 111986 - 112417 | 16351.7 |
| hypothetical protein | BACPLE_00111 | Not Available | Negative | 112392 - 112511 | 4664.01 |
| ribosomal protein l17 | BACPLE_00112 | Not Available | Negative | 112597 - 113091 | 18209.9 |
| dna-directed rna polymerase, alpha subunit | BACPLE_00113 | Not Available | Negative | 113095 - 114087 | 37506.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

