Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | DSM 17135 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1232116 bp
Thymine Count
1229996 bp
Guanine Count
991003 bp
Cytosine Count
968209 bp
Genome Length
4421324 bp
Protein-coding Genes
3919 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BACPLE_01357 | Not Available | Positive | 1474954 - 1475388 | 16494.8 |
| glycosyl hydrolase family 2, sugar binding domain protein | BACPLE_01358 | Not Available | Positive | 1475773 - 1478559 | 104279.0 |
| mfs transporter, sp family | BACPLE_01359 | Not Available | Positive | 1478587 - 1479972 | 50304.7 |
| hypothetical protein | BACPLE_01360 | Not Available | Positive | 1480003 - 1481586 | 59753.3 |
| hypothetical protein | BACPLE_01361 | Not Available | Positive | 1481616 - 1482326 | 26904.2 |
| tetratricopeptide repeat protein | BACPLE_01362 | Not Available | Positive | 1482451 - 1485816 | 129172.0 |
| hypothetical protein | BACPLE_01363 | Not Available | Positive | 1485907 - 1487253 | 50190.6 |
| tonb-linked outer membrane protein, susc/raga family | BACPLE_01364 | Not Available | Positive | 1487269 - 1490289 | 111785.0 |
| susd family protein | BACPLE_01365 | Not Available | Positive | 1490302 - 1491921 | 61264.1 |
| hypothetical protein | BACPLE_01366 | Not Available | Positive | 1491967 - 1493712 | 65231.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

