Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | DSM 17135 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1232116 bp
Thymine Count
1229996 bp
Guanine Count
991003 bp
Cytosine Count
968209 bp
Genome Length
4421324 bp
Protein-coding Genes
3919 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BACPLE_01316 | Not Available | Positive | 1437541 - 1437810 | 10425.4 |
| hypothetical protein | BACPLE_01317 | Not Available | Positive | 1437882 - 1438331 | 17702.2 |
| hypothetical protein | BACPLE_01318 | Not Available | Positive | 1438328 - 1438807 | 18186.0 |
| hypothetical protein | BACPLE_01319 | Not Available | Positive | 1438829 - 1439089 | 9998.22 |
| zeta toxin | BACPLE_01320 | Not Available | Positive | 1439076 - 1439942 | 32860.7 |
| peptidase, m23 family | BACPLE_01322 | Not Available | Negative | 1439989 - 1440654 | 25188.4 |
| hypothetical protein | BACPLE_01321 | Not Available | Positive | 1440635 - 1441414 | 30087.6 |
| hypothetical protein | BACPLE_01323 | Not Available | Positive | 1441416 - 1442975 | 58899.6 |
| hypothetical protein | BACPLE_01324 | Not Available | Positive | 1442980 - 1444089 | 42741.0 |
| toxin secretion/phage lysis holin | BACPLE_01325 | Not Available | Positive | 1444086 - 1444589 | 20038.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

