Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | DSM 17135 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1232116 bp
Thymine Count
1229996 bp
Guanine Count
991003 bp
Cytosine Count
968209 bp
Genome Length
4421324 bp
Protein-coding Genes
3919 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BACPLE_01306 | Not Available | Positive | 1430887 - 1431909 | 37691.8 |
| conjugative transposon trak protein | BACPLE_01307 | Not Available | Positive | 1431942 - 1432556 | 23412.7 |
| hypothetical protein | BACPLE_01308 | Not Available | Positive | 1432556 - 1432987 | 16696.8 |
| conjugative transposon tram protein | BACPLE_01309 | Not Available | Positive | 1432991 - 1434100 | 41780.8 |
| conjugative transposon tran protein | BACPLE_01310 | Not Available | Positive | 1434102 - 1434941 | 32360.3 |
| hypothetical protein | BACPLE_01311 | Not Available | Positive | 1434954 - 1435457 | 19086.8 |
| hypothetical protein | BACPLE_01312 | Not Available | Positive | 1435460 - 1436119 | 23717.9 |
| ompa family protein | BACPLE_01313 | Not Available | Positive | 1436122 - 1436763 | 23821.2 |
| hypothetical protein | BACPLE_01314 | Not Available | Negative | 1436744 - 1436995 | 9473.27 |
| hypothetical protein | BACPLE_01315 | Not Available | Positive | 1437240 - 1437377 | 5391.39 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

