Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | DSM 17135 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1232116 bp
Thymine Count
1229996 bp
Guanine Count
991003 bp
Cytosine Count
968209 bp
Genome Length
4421324 bp
Protein-coding Genes
3919 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydrolase, nudix family | BACPLE_00094 | Not Available | Negative | 90865 - 91395 | 19819.7 |
| transcriptional regulator, asnc family | BACPLE_00095 | Not Available | Positive | 91670 - 92140 | 17449.3 |
| hypothetical protein | BACPLE_00096 | Not Available | Positive | 92140 - 92457 | 12355.3 |
| butyrate kinase | BACPLE_00097 | Not Available | Negative | 92739 - 93857 | 40844.2 |
| phosphate acetyl/butyryl transferase | BACPLE_00098 | Not Available | Negative | 93830 - 94750 | 33457.7 |
| bnr/asp-box repeat protein | BACPLE_00099 | Not Available | Negative | 95097 - 96725 | 60537.4 |
| bnr/asp-box repeat protein | BACPLE_00100 | Not Available | Negative | 96744 - 97838 | 40893.9 |
| susd family protein | BACPLE_00101 | Not Available | Negative | 97897 - 99354 | 55294.2 |
| tonb-linked outer membrane protein, susc/raga family | BACPLE_00102 | Not Available | Negative | 99367 - 102657 | 121811.0 |
| putative n-acetylneuraminate lyase | BACPLE_00103 | Not Available | Negative | 102724 - 103641 | 33734.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

