Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | DSM 17135 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1232116 bp
Thymine Count
1229996 bp
Guanine Count
991003 bp
Cytosine Count
968209 bp
Genome Length
4421324 bp
Protein-coding Genes
3919 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BACPLE_01226 | Not Available | Negative | 1377855 - 1378136 | 11120.8 |
| hypothetical protein | BACPLE_01227 | Not Available | Negative | 1378291 - 1379295 | 37495.1 |
| reverse transcriptase (rna-dependent dna polymerase) | BACPLE_01228 | Not Available | Negative | 1379259 - 1381076 | 71060.3 |
| trag family protein | BACPLE_01229 | Not Available | Negative | 1381603 - 1382766 | 45199.5 |
| relaxase/mobilization nuclease domain protein | BACPLE_01230 | Not Available | Negative | 1382804 - 1383949 | 43081.1 |
| hypothetical protein | BACPLE_01231 | Not Available | Negative | 1383943 - 1384365 | 15977.2 |
| hypothetical protein | BACPLE_01232 | Not Available | Negative | 1384756 - 1384998 | 8584.66 |
| hypothetical protein | BACPLE_01233 | Not Available | Positive | 1385069 - 1385821 | 28824.8 |
| hypothetical protein | BACPLE_01234 | Not Available | Positive | 1385828 - 1386250 | 16114.7 |
| hypothetical protein | BACPLE_01235 | Not Available | Positive | 1386369 - 1386710 | 13095.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

