Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | DSM 17135 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1232116 bp
Thymine Count
1229996 bp
Guanine Count
991003 bp
Cytosine Count
968209 bp
Genome Length
4421324 bp
Protein-coding Genes
3919 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BACPLE_01196 | Not Available | Negative | 1356601 - 1356723 | 4693.52 |
| dna topoisomerase | BACPLE_01197 | Not Available | Negative | 1356733 - 1358832 | 77771.2 |
| hypothetical protein | BACPLE_01198 | Not Available | Negative | 1358848 - 1359063 | 8326.8 |
| hypothetical protein | BACPLE_01199 | Not Available | Negative | 1359067 - 1360524 | 55137.0 |
| hypothetical protein | BACPLE_01200 | Not Available | Positive | 1360612 - 1360755 | 4923.77 |
| integron integrase | BACPLE_01201 | Not Available | Positive | 1360837 - 1361955 | 43668.8 |
| smi1 / knr4 family protein | BACPLE_01202 | Not Available | Positive | 1362028 - 1362558 | 20235.4 |
| hypothetical protein | BACPLE_01203 | Not Available | Positive | 1362596 - 1363231 | 24704.4 |
| hypothetical protein | BACPLE_01204 | Not Available | Positive | 1363309 - 1364205 | 35227.9 |
| hypothetical protein | BACPLE_01205 | Not Available | Positive | 1364387 - 1365061 | 26107.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

