Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | DSM 17135 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1232116 bp
Thymine Count
1229996 bp
Guanine Count
991003 bp
Cytosine Count
968209 bp
Genome Length
4421324 bp
Protein-coding Genes
3919 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BACPLE_01186 | Not Available | Positive | 1339889 - 1340836 | 36252.0 |
| ghmp kinase, n-terminal domain protein | BACPLE_01187 | Not Available | Positive | 1340833 - 1343676 | 105765.0 |
| nucleotide sugar dehydrogenase | BACPLE_01188 | Not Available | Positive | 1343747 - 1345069 | 49486.4 |
| hypothetical protein | BACPLE_01189 | Not Available | Positive | 1345144 - 1345473 | 12949.6 |
| transcriptional regulator, arac family | BACPLE_01190 | Not Available | Positive | 1345956 - 1346813 | 33001.4 |
| rtec protein | BACPLE_01191 | Not Available | Positive | 1346919 - 1347779 | 33749.5 |
| hypothetical protein | BACPLE_01192 | Not Available | Negative | 1347826 - 1349667 | 68352.6 |
| hypothetical protein | BACPLE_01193 | Not Available | Positive | 1349764 - 1349967 | 7804.33 |
| helicase c-terminal domain protein | BACPLE_01194 | Not Available | Negative | 1350031 - 1356153 | 231951.0 |
| hypothetical protein | BACPLE_01195 | Not Available | Negative | 1356140 - 1356649 | 19259.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

