Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | DSM 17135 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1232116 bp
Thymine Count
1229996 bp
Guanine Count
991003 bp
Cytosine Count
968209 bp
Genome Length
4421324 bp
Protein-coding Genes
3919 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-gly | Not Available | Not Available | Positive | 80285 - 80357 | Not Available |
| argininosuccinate lyase | BACPLE_00085 | Not Available | Negative | 80434 - 81798 | 51507.4 |
| hypothetical protein | BACPLE_00086 | Not Available | Negative | 81815 - 82243 | 16384.2 |
| orotate phosphoribosyltransferase | BACPLE_00087 | Not Available | Negative | 82372 - 83007 | 23302.2 |
| comf family protein | BACPLE_00088 | Not Available | Negative | 83109 - 83798 | 25625.4 |
| regulatory protein recx | BACPLE_00089 | Not Available | Negative | 83782 - 84261 | 19078.9 |
| protein-(glutamine-n5) methyltransferase, release factor-specific | BACPLE_00090 | Not Available | Negative | 84258 - 85100 | 32022.3 |
| riboflavin biosynthesis protein ribd | BACPLE_00091 | Not Available | Positive | 85133 - 86173 | 38674.0 |
| hypothetical protein | BACPLE_00092 | Not Available | Negative | 86176 - 87837 | 62397.9 |
| tetratricopeptide repeat protein | BACPLE_00093 | Not Available | Negative | 87839 - 90856 | 114569.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

