Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | DSM 17135 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1232116 bp
Thymine Count
1229996 bp
Guanine Count
991003 bp
Cytosine Count
968209 bp
Genome Length
4421324 bp
Protein-coding Genes
3919 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase, group 1 family protein | BACPLE_01166 | Not Available | Positive | 1320128 - 1321264 | 44190.5 |
| glucose-1-phosphate thymidylyltransferase | BACPLE_01167 | Not Available | Positive | 1321284 - 1322189 | 33399.1 |
| dtdp-4-dehydrorhamnose 3,5-epimerase | BACPLE_01168 | Not Available | Positive | 1322241 - 1322804 | 21287.2 |
| dtdp-4-dehydrorhamnose reductase | BACPLE_01169 | Not Available | Positive | 1322850 - 1323761 | 33663.2 |
| dtdp-glucose 4,6-dehydratase | BACPLE_01170 | Not Available | Positive | 1323780 - 1324925 | 44222.3 |
| nucleotide sugar dehydrogenase | BACPLE_01171 | Not Available | Positive | 1324928 - 1326259 | 49927.5 |
| lyttr dna-binding domain protein | BACPLE_01172 | Not Available | Positive | 1326533 - 1327030 | 19369.7 |
| hypothetical protein | BACPLE_01174 | Not Available | Negative | 1327080 - 1327658 | 21764.9 |
| hypothetical protein | BACPLE_01173 | Not Available | Positive | 1327647 - 1328366 | 25267.8 |
| hypothetical protein | BACPLE_01175 | Not Available | Positive | 1328535 - 1328750 | 7328.81 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

