Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | DSM 17135 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1232116 bp
Thymine Count
1229996 bp
Guanine Count
991003 bp
Cytosine Count
968209 bp
Genome Length
4421324 bp
Protein-coding Genes
3919 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| n-acetylmuramoyl-l-alanine amidase | BACPLE_01146 | Not Available | Negative | 1303534 - 1303977 | 16632.0 |
| putative dna-binding protein | BACPLE_01147 | Not Available | Negative | 1304078 - 1304515 | 15814.9 |
| hypothetical protein | BACPLE_01148 | Not Available | Positive | 1304593 - 1304718 | 4934.04 |
| replicative dna helicase | BACPLE_01149 | Not Available | Negative | 1304761 - 1306083 | 49542.2 |
| hypothetical protein | BACPLE_01150 | Not Available | Negative | 1306090 - 1306725 | 24694.2 |
| hypothetical protein | BACPLE_01151 | Not Available | Negative | 1306840 - 1307073 | 9391.66 |
| hypothetical protein | BACPLE_01152 | Not Available | Negative | 1307225 - 1307494 | 10384.6 |
| hypothetical protein | BACPLE_01153 | Not Available | Negative | 1307567 - 1307707 | 5109.28 |
| hypothetical protein | BACPLE_01154 | Not Available | Positive | 1307743 - 1307943 | 7569.2 |
| polysaccharide biosynthesis/export protein | BACPLE_01155 | Not Available | Positive | 1307940 - 1308737 | 29175.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

