Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | DSM 17135 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1232116 bp
Thymine Count
1229996 bp
Guanine Count
991003 bp
Cytosine Count
968209 bp
Genome Length
4421324 bp
Protein-coding Genes
3919 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp synthase f1, beta subunit | BACPLE_01136 | Not Available | Negative | 1291000 - 1292529 | 56031.3 |
| hypothetical protein | BACPLE_01137 | Not Available | Negative | 1292855 - 1293271 | 15716.3 |
| hypothetical protein | BACPLE_01138 | Not Available | Negative | 1293312 - 1294499 | 43530.0 |
| abc transporter, atp-binding protein | BACPLE_01139 | Not Available | Negative | 1294521 - 1295165 | 24437.5 |
| hypothetical protein | BACPLE_01140 | Not Available | Negative | 1295244 - 1296749 | 55571.3 |
| rna methyltransferase, rsme family | BACPLE_01141 | Not Available | Negative | 1296774 - 1297475 | 26407.0 |
| hypothetical protein | BACPLE_01142 | Not Available | Negative | 1297480 - 1298184 | 26931.3 |
| nucleoside transporter | BACPLE_01143 | Not Available | Negative | 1298198 - 1299463 | 45996.8 |
| polysaccharide biosynthesis/export protein | BACPLE_01144 | Not Available | Negative | 1299486 - 1301930 | 89065.5 |
| glycosyltransferase, group 4 family | BACPLE_01145 | Not Available | Negative | 1302329 - 1303435 | 41686.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

