Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | DSM 17135 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1232116 bp
Thymine Count
1229996 bp
Guanine Count
991003 bp
Cytosine Count
968209 bp
Genome Length
4421324 bp
Protein-coding Genes
3919 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BACPLE_01116 | Not Available | Negative | 1271984 - 1273978 | 75841.0 |
| adp-ribosylglycohydrolase | BACPLE_01117 | Not Available | Positive | 1274147 - 1274941 | 28978.2 |
| cupin domain protein | BACPLE_01118 | Not Available | Negative | 1275097 - 1275528 | 15510.7 |
| polysaccharide lyase family 8, super-sandwich domain protein | BACPLE_01119 | Not Available | Negative | 1275554 - 1277686 | 80948.3 |
| hypothetical protein | BACPLE_01120 | Not Available | Negative | 1277711 - 1278286 | 21952.9 |
| pyruvate, phosphate dikinase | BACPLE_01121 | Not Available | Negative | 1278405 - 1281131 | 100705.0 |
| hypothetical protein | BACPLE_01122 | Not Available | Negative | 1281071 - 1281322 | 9768.34 |
| 23s rrna (uracil-5-)-methyltransferase ruma | BACPLE_01123 | Not Available | Positive | 1281344 - 1282762 | 53933.7 |
| pseudouridine synthase, rlua family | BACPLE_01124 | Not Available | Positive | 1282804 - 1283730 | 35931.6 |
| had hydrolase, family ia, variant 3 | BACPLE_01125 | Not Available | Positive | 1283740 - 1284366 | 23675.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

