Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | DSM 17135 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1232116 bp
Thymine Count
1229996 bp
Guanine Count
991003 bp
Cytosine Count
968209 bp
Genome Length
4421324 bp
Protein-coding Genes
3919 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BACPLE_01076 | Not Available | Positive | 1228068 - 1228559 | 18805.6 |
| putative dtdp-4-dehydrorhamnose reductase | BACPLE_01077 | Not Available | Positive | 1228580 - 1229497 | 34215.8 |
| peptidyl-prolyl cis-trans isomerase, fkbp-type | BACPLE_01078 | Not Available | Positive | 1229543 - 1229941 | 14620.7 |
| alcohol dehydrogenase, iron-dependent | BACPLE_01079 | Not Available | Negative | 1229970 - 1231139 | 42320.8 |
| hypothetical protein | BACPLE_01080 | Not Available | Negative | 1231267 - 1232043 | 29086.8 |
| transcriptional regulator, tetr family | BACPLE_01081 | Not Available | Negative | 1232110 - 1232727 | 23526.5 |
| hypothetical protein | BACPLE_01082 | Not Available | Negative | 1232709 - 1232882 | 6558.81 |
| transcriptional regulator, arac family | BACPLE_01083 | Not Available | Positive | 1232940 - 1233848 | 35122.9 |
| atpase/histidine kinase/dna gyrase b/hsp90 domain protein | BACPLE_01084 | Not Available | Negative | 1233858 - 1237979 | 156237.0 |
| tonb-linked outer membrane protein, susc/raga family | BACPLE_01085 | Not Available | Positive | 1238105 - 1241434 | 123585.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

