Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | DSM 17135 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1232116 bp
Thymine Count
1229996 bp
Guanine Count
991003 bp
Cytosine Count
968209 bp
Genome Length
4421324 bp
Protein-coding Genes
3919 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BACPLE_01066 | Not Available | Negative | 1216861 - 1217733 | 32439.6 |
| crispr-associated protein, csd1 family | BACPLE_01067 | Not Available | Negative | 1217748 - 1219538 | 67809.4 |
| crispr-associated protein cas5, dvulg subtype | BACPLE_01068 | Not Available | Negative | 1219535 - 1220206 | 26153.3 |
| crispr-associated endonuclease cas3-hd | BACPLE_01069 | Not Available | Negative | 1220216 - 1222435 | 84540.3 |
| putative dna-binding protein | BACPLE_01070 | Not Available | Negative | 1222454 - 1223050 | 22686.2 |
| helicase c-terminal domain protein | BACPLE_01071 | Not Available | Negative | 1223265 - 1226384 | 119590.0 |
| hypothetical protein | BACPLE_01072 | Not Available | Positive | 1226502 - 1226810 | 11511.5 |
| mutator mutt protein | BACPLE_01074 | Not Available | Negative | 1226807 - 1227310 | 19234.9 |
| hypothetical protein | BACPLE_01073 | Not Available | Positive | 1227305 - 1227964 | 23671.1 |
| hypothetical protein | BACPLE_01075 | Not Available | Negative | 1227924 - 1228055 | 4943.09 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

